Cheng, L. K., and P. J. Unrau. (2010) Closing the Circle: Replicating RNA with RNA. Cold Spring Harb Perspect Biol 2: a002204.
Chernikova, D., S. Motamedi, M. Csuros, E. V. Koonin, and I. B. Rogozin. (2011) A Late Origin of the Extant Eukaryotic Diversity: Divergence Time Estimates Using Rare Genomic Changes. Biol Direct, in press.
Ciccarelli, F. D., T. Doerks, C. von Mering, C. J. Creevey, B. Snel, and P. Bork. (2006) Toward Automatic Reconstruction of a Highly Resolved Tree of Life. Science 311: 1,283—1,287.
Clapier, C. R., and B. R. Cairns. (2009) The Biology of Chromatin Remodeling Complexes. Annu Rev Biochem 78: 273–304.
Claverie, J. M. (2006) Viruses Take Center Stage in Cellular Evolution. Genome Biol 7: 110.
Collins, L., and D. Penny. (2005) Complex Spliceosomal Organization Ancestral to Extant Eukaryotes. Mol Biol Evol 22: 1,053—1,066.
Cortez, D., P. Forterre, and S. Gribaldo. (2009) A Hidden Reservoir of Integrative Elements Is the Major Source of Recently Acquired Foreign Genes and Orfans in Archaeal and Bacterial Genomes. Genome Biol 10: R65.
Costanzo, G., S. Pino, F. Ciciriello, and E. Di Mauro. (2009) Generation of Long RNA Chains in Water. J Biol Chem 284: 33,206—33,216.
Costanzo, G., R. Saladino, C. Crestini, F. Ciciriello, and E. Di Mauro. (2007) Nucleoside Phosphorylation by Phosphate Minerals. J Biol Chem 282: 16,729—16,735.
Cox, C. J., P. G. Foster, R. P. Hirt, S. R. Harris, and T. M. Embley. (2008) The Archaebacterial Origin of Eukaryotes. Proc Natl Acad Sci USA 105: 20,356—20,361.
Cox, M. M., and J. R. Battista. (2005) Deinococcus Radiodurans — the Consummate Survivor. Nat Rev Microbiol 3: 882–892.
Crick, F. (1970) Central Dogma of Molecular Biology. Nature 227: 561–563.
Crick, F. H. (1958) On Protein Synthesis. Symp Soc Exp Biol 12: 138–163.
Crick, F. H. (1968) The Origin of the Genetic Code. J Mol Biol 38: 367–379.
Csuros, M., and I. Miklos. (2009) Streamlining and Large Ancestral Genomes in Archaea Inferred with a Phylogenetic Birth-and-Death Model. Mol Biol Evol 26: 2,087—2,095.
Csuros, M., I. B. Rogozin, and E. V. Koonin. (2011) Resonstructed HumanLike Intron Density in the Last Common Ancestor of Eukaryotes. PLoS Comput Biol, in press.
D’Herelle, F. (1922). The Bacteriophage; Its Role in Immunity. Baltimore: Williams and Wilkins. Dagan, T., and W. Martin. (2006) The Tree of One Percent. Genome Biol 7: 118.
Daly, M. J. (2009) A New Perspective on Radiation Resistance Based on Deinococcus Radiodurans. Nat Rev Microbiol 7: 237–245.
Danchin, A. (2003). The Delphic Boat: What Genomes Tell Us. Cambridge, MA: Harvard Univ Press.
Darwin, C. (1859) On the Origin of Species. London: Murray. Darwin, C. (1872) Origin of Species. New York: The Modern Library.
Daubin, V., and H. Ochman. (2004) Bacterial Genomes As New Gene Homes: The Genealogy of Orfans in E. Coli. Genome Res 14: 1,036—1,042.
Davidov, Y., and E. Jurkevitch. (2009) Predation Between Prokaryotes and the Origin of Eukaryotes. Bioessays 31: 748–757.
Daviter, T., K. B. Gromadski, and M. V. Rodnina. (2006) The Ribosome’s Response to Codon-Anticodon Mismatches. Biochimie 88: 1,001—1,011.
Dawkins, R. (1996) The Blind Watchmaker: Why the Evidence of Evolution Reveals a Universe Without Design. London: W.W. Norton & Co.
Dawkins, R. (2006) The Selfish Gene: 30th Anniversary Edition — with a New Introduction by the Author. Oxford: Oxford University Press.
Dayhoff, M. O., W. C. Barker, and L. T. Hunt. (1983) Establishing Homologies in Protein Sequences. Methods Enzymol 91: 524–545.
de Nooijer, S., B. R. Holland, and D. Penny. (2009) The Emergence of Predators in Early Life: There Was No Garden of Eden. PLoS ONE 4: e5507.